Ferruginivarius sediminum strain WD2A32

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodovibrionaceae

Genus

Ferruginivarius

Description

Ferruginivarius sediminum strain WD2A32 is characterized by having a single replicon, which suggests a streamlined genetic organization potentially advantageous for its ecological niche. This strain is cataloged under the accession number QPMH00000000.1, indicating that it has been sequenced and is available for further study in genomic databases. The traits of Ferruginivarius sediminum strain WD2A32 imply its potential role in biogeochemical cycling, particularly in sediment environments where iron is present. The genus Ferruginivarius is typically associated with iron-rich habitats, and the presence of a single replicon may facilitate efficient adaptation and survival in such conditions. Understanding the specific ecological role of Ferruginivarius sediminum strain WD2A32 can provide insights into the dynamics of microbial communities in sedimentary ecosystems, particularly in relation to iron mobilization and transformation processes. The genomic data associated with this strain could further elucidate its metabolic pathways and interactions within its habitat, contributing to our comprehension of microbial ecology and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyRhodovibrionaceae
GenusFerruginivarius
SpeciesFerruginivarius sediminum
Strainstrain WD2A32

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold72, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3848 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite transporterDRB17_16995Not AvailablePositive3614264 - 361588356168.3
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolaseDRB17_17000Not AvailablePositive3615970 - 361691433575.8
dna topoisomerase iv subunit aDRB17_17005Not AvailableNegative3617035 - 361927883774.1
hypothetical proteinDRB17_17010Not AvailableNegative3619428 - 361976311916.3
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseDRB17_17015Not AvailableNegative3619935 - 362059122418.3
sugar kinaseDRB17_17020Not AvailableNegative3620588 - 362155034252.2
c4-dicarboxylate abc transporter permeaseDRB17_17025Not AvailableNegative3621540 - 362297950236.2
trap transporter small permeaseDRB17_17030Not AvailableNegative3622981 - 362358621890.0
c4-dicarboxylate abc transporter substrate-binding proteinDRB17_17035Not AvailableNegative3623655 - 362468637052.0
sis domain-containing proteinDRB17_17040Not AvailableNegative3624683 - 362567836287.2

Displaying genes 3401 – 3410 of 3931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.