Ferruginivarius sediminum strain WD2A32

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodovibrionaceae

Genus

Ferruginivarius

Description

Ferruginivarius sediminum strain WD2A32 is characterized by having a single replicon, which suggests a streamlined genetic organization potentially advantageous for its ecological niche. This strain is cataloged under the accession number QPMH00000000.1, indicating that it has been sequenced and is available for further study in genomic databases. The traits of Ferruginivarius sediminum strain WD2A32 imply its potential role in biogeochemical cycling, particularly in sediment environments where iron is present. The genus Ferruginivarius is typically associated with iron-rich habitats, and the presence of a single replicon may facilitate efficient adaptation and survival in such conditions. Understanding the specific ecological role of Ferruginivarius sediminum strain WD2A32 can provide insights into the dynamics of microbial communities in sedimentary ecosystems, particularly in relation to iron mobilization and transformation processes. The genomic data associated with this strain could further elucidate its metabolic pathways and interactions within its habitat, contributing to our comprehension of microbial ecology and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyRhodovibrionaceae
GenusFerruginivarius
SpeciesFerruginivarius sediminum
Strainstrain WD2A32

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold72, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3848 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminopeptidase p family proteinDRB17_16390Not AvailableNegative3497773 - 349891542090.1
ectoine/hydroxyectoine abc transporter substrate-binding protein ehubDRB17_16395Not AvailablePositive3499180 - 350003730053.5
ectoine/hydroxyectoine abc transporter permease subunit ehucDRB17_16400Not AvailablePositive3500169 - 350082824213.6
ectoine/hydroxyectoine abc transporter permease subunit ehudDRB17_16405Not AvailablePositive3500825 - 350149624721.0
ectoine/hydroxyectoine abc transporter atp-binding protein ehuaDRB17_16410Not AvailablePositive3501504 - 350227428327.7
adenylosuccinate lyaseDRB17_16415Not AvailableNegative3502333 - 350363148052.3
merr family transcriptional regulatorDRB17_16420Not AvailableNegative3503745 - 350417615603.9
mercury resistance system transport protein merfDRB17_16425Not AvailablePositive3504340 - 35045437313.29
hypothetical proteinDRB17_16430Not AvailablePositive3504540 - 35047437389.73
jab domain-containing proteinDRB17_16435Not AvailableNegative3504748 - 350557829849.1

Displaying genes 3281 – 3290 of 3931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.