Ferruginivarius sediminum strain WD2A32

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodovibrionaceae

Genus

Ferruginivarius

Description

Ferruginivarius sediminum strain WD2A32 is characterized by having a single replicon, which suggests a streamlined genetic organization potentially advantageous for its ecological niche. This strain is cataloged under the accession number QPMH00000000.1, indicating that it has been sequenced and is available for further study in genomic databases. The traits of Ferruginivarius sediminum strain WD2A32 imply its potential role in biogeochemical cycling, particularly in sediment environments where iron is present. The genus Ferruginivarius is typically associated with iron-rich habitats, and the presence of a single replicon may facilitate efficient adaptation and survival in such conditions. Understanding the specific ecological role of Ferruginivarius sediminum strain WD2A32 can provide insights into the dynamics of microbial communities in sedimentary ecosystems, particularly in relation to iron mobilization and transformation processes. The genomic data associated with this strain could further elucidate its metabolic pathways and interactions within its habitat, contributing to our comprehension of microbial ecology and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyRhodovibrionaceae
GenusFerruginivarius
SpeciesFerruginivarius sediminum
Strainstrain WD2A32

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold72, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3848 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate-5-semialdehyde dehydrogenaseDRB17_14435Not AvailablePositive3082370 - 308366245231.3
ggdef domain-containing proteinDRB17_14440Not AvailablePositive3084164 - 308524640220.6
flavodoxin family proteinDRB17_14445Not AvailableNegative3085272 - 308606029645.8
lysr family transcriptional regulatorDRB17_14450Not AvailablePositive3086162 - 308705832654.3
pas domain s-box proteinDRB17_14455Not AvailableNegative3087077 - 308784727031.9
pyrimidine 5'-nucleotidaseDRB17_14460Not AvailablePositive3088004 - 308866624546.9
methyl-accepting chemotaxis proteinDRB17_14465Not AvailableNegative3088663 - 309131193113.6
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseDRB17_14470Not AvailablePositive3091734 - 309259130737.5
succinyl-diaminopimelate desuccinylaseDRB17_14475Not AvailablePositive3092588 - 309374241303.8
hypothetical proteinDRB17_14480Not AvailablePositive3093742 - 309431720845.7

Displaying genes 2891 – 2900 of 3931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.