Ferruginivarius sediminum strain WD2A32

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodovibrionaceae

Genus

Ferruginivarius

Description

Ferruginivarius sediminum strain WD2A32 is characterized by having a single replicon, which suggests a streamlined genetic organization potentially advantageous for its ecological niche. This strain is cataloged under the accession number QPMH00000000.1, indicating that it has been sequenced and is available for further study in genomic databases. The traits of Ferruginivarius sediminum strain WD2A32 imply its potential role in biogeochemical cycling, particularly in sediment environments where iron is present. The genus Ferruginivarius is typically associated with iron-rich habitats, and the presence of a single replicon may facilitate efficient adaptation and survival in such conditions. Understanding the specific ecological role of Ferruginivarius sediminum strain WD2A32 can provide insights into the dynamics of microbial communities in sedimentary ecosystems, particularly in relation to iron mobilization and transformation processes. The genomic data associated with this strain could further elucidate its metabolic pathways and interactions within its habitat, contributing to our comprehension of microbial ecology and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyRhodovibrionaceae
GenusFerruginivarius
SpeciesFerruginivarius sediminum
Strainstrain WD2A32

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold72, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3848 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aarf/abc1/ubib kinase family proteinDRB17_10630Not AvailableNegative2286372 - 228780254098.4
methyltransferase domain-containing proteinDRB17_10635Not AvailablePositive2288421 - 228917628599.9
murr/rpir family transcriptional regulatorDRB17_10640Not AvailableNegative2289213 - 229008532349.7
c4-dicarboxylate abc transporterDRB17_10645Not AvailablePositive2290302 - 229136940583.6
hypothetical proteinDRB17_10650Not AvailablePositive2291394 - 229171111401.4
n-formylglutamate amidohydrolaseDRB17_10655Not AvailablePositive2291871 - 229268329611.1
glutamine synthetaseDRB17_10660Not AvailablePositive2292752 - 229410751170.0
aldehyde dehydrogenase family proteinDRB17_10665Not AvailablePositive2294154 - 229554249710.1
iron-containing alcohol dehydrogenaseDRB17_10670Not AvailablePositive2295561 - 229673040791.0
trap transporter small permeaseDRB17_10675Not AvailablePositive2296883 - 229739519362.2

Displaying genes 2141 – 2150 of 3931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.