Halorubrum sp. Atlit-9R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. Atlit-9R is a rod-shaped archaeon that possesses flagella, which suggests it has the capability for motility. This organism is characterized by a single replicon, indicating a streamlined genomic structure. The genomic sequence for Halorubrum sp. Atlit-9R is available under the accession number QPLU00000000.1, providing a reference for further genetic and functional studies. The presence of flagella in Halorubrum sp. Atlit-9R may offer advantages in its ecological niche, potentially facilitating movement towards optimal environments or resources. This motility can be crucial for survival in varying salinity levels often found in hypersaline habitats, where many members of the Halorubrum genus thrive. The rod shape might also contribute to its adaptability in such challenging conditions by enhancing surface area-to-volume ratios, which can be beneficial for nutrient uptake and interaction with the environment. In summary, Halorubrum sp. Atlit-9R's rod shape, motility through flagella, and simple genomic configuration reflect its adaptation to specialized ecological niches, particularly in hypersaline environments. Understanding these traits can provide insights into the evolutionary strategies employed by extremophiles in harsh habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. Atlit-9R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. Atlit-9R P_contig000263, whole genome shotgun

Gene Summary

Adenine Count

608579 bp

Thymine Count

601584 bp

Guanine Count

1354770 bp

Cytosine Count

1344417 bp

Genome Length

3909350 bp

Protein-coding Genes

3848 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDVK08_01565Not AvailablePositive310516 - 31091412875.4
hypothetical proteinDVK08_01570Not AvailableNegative311028 - 31211036967.0
glycerol kinaseDVK08_01575Not AvailableNegative312195 - 31373356861.2
anaerobic glycerol-3-phosphate dehydrogenase subunit aDVK08_01580Not AvailablePositive314105 - 31590464848.1
glycerol-3-phosphate dehydrogenase subunit glpbDVK08_01585Not AvailablePositive315904 - 31728348202.9
anaerobic glycerol-3-phosphate dehydrogenase subunit cDVK08_01590Not AvailablePositive317280 - 31884856801.4
hypothetical proteinDVK08_01595Not AvailablePositive319000 - 32001036659.5
crtac1 family proteinDVK08_01600Not AvailablePositive320092 - 32149849345.1
hypothetical proteinDVK08_01605Not AvailablePositive321603 - 3218037082.92
ribosome assembly factor sbdsDVK08_01610Not AvailablePositive321920 - 32264527052.3

Displaying genes 321 – 330 of 3915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.