Halorubrum sp. Atlit-9R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. Atlit-9R is a rod-shaped archaeon that possesses flagella, which suggests it has the capability for motility. This organism is characterized by a single replicon, indicating a streamlined genomic structure. The genomic sequence for Halorubrum sp. Atlit-9R is available under the accession number QPLU00000000.1, providing a reference for further genetic and functional studies. The presence of flagella in Halorubrum sp. Atlit-9R may offer advantages in its ecological niche, potentially facilitating movement towards optimal environments or resources. This motility can be crucial for survival in varying salinity levels often found in hypersaline habitats, where many members of the Halorubrum genus thrive. The rod shape might also contribute to its adaptability in such challenging conditions by enhancing surface area-to-volume ratios, which can be beneficial for nutrient uptake and interaction with the environment. In summary, Halorubrum sp. Atlit-9R's rod shape, motility through flagella, and simple genomic configuration reflect its adaptation to specialized ecological niches, particularly in hypersaline environments. Understanding these traits can provide insights into the evolutionary strategies employed by extremophiles in harsh habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. Atlit-9R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. Atlit-9R P_contig000263, whole genome shotgun

Gene Summary

Adenine Count

608579 bp

Thymine Count

601584 bp

Guanine Count

1354770 bp

Cytosine Count

1344417 bp

Genome Length

3909350 bp

Protein-coding Genes

3848 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside phosphorylaseDVK08_09100Not AvailablePositive1831819 - 183254425520.7
hypothetical proteinDVK08_09105Not AvailableNegative1832575 - 183302115927.5
trna(met) cytidine acetyltransferaseDVK08_09110Not AvailablePositive1833151 - 183544280938.7
ferredoxin family proteinDVK08_09115Not AvailableNegative1835827 - 183615611926.8
glutamate--trna ligaseDVK08_09120Not AvailableNegative1836249 - 183802165318.1
hypothetical proteinDVK08_09125Not AvailablePositive1838380 - 18386168247.27
5'/3'-nucleotidase sureDVK08_09130Not AvailableNegative1838674 - 183955830643.2
carbamoyl-phosphate synthase small subunitDVK08_09135Not AvailableNegative1839754 - 184081537495.2
lrp/asnc family transcriptional regulatorDVK08_09140Not AvailablePositive1840912 - 184132515674.6
isocitrate dehydrogenase (nadp(+))DVK08_09145Not AvailableNegative1841723 - 184298545573.0

Displaying genes 1801 – 1810 of 3915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.