Haloferax sp. Atlit-105R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloferax

Description

Haloferax sp. Atlit-105R is a Gram-negative archaeon characterized by its rod-shaped morphology. This organism possesses flagella, which suggests it has the capability for motility, a trait that can be advantageous for survival in its natural habitat. The genome of Haloferax sp. Atlit-105R is represented by a single replicon, indicating a streamlined genetic organization typical of many archaeal species. The strain has been assigned the accession number QPLP00000000.1, which facilitates its identification in genomic databases and allows researchers to access its genetic information for further study. In terms of ecological significance, the motility conferred by flagella may play a crucial role in the organism's ability to navigate its environment, potentially aiding in nutrient acquisition and colonization of specific niches within saline ecosystems. This adaptability can be particularly important in extreme environments, where competition for resources may be intense. Thus, Haloferax sp. Atlit-105R exemplifies how specific morphological and genetic traits can contribute to the ecological success of microorganisms in challenging habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloferax
SpeciesHaloferax sp. Atlit-105R
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Haloferax sp. Atlit-105R
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloferax sp. Atlit-105R P_contig000091, whole genome shotgun

Gene Summary

Adenine Count

661261 bp

Thymine Count

660876 bp

Guanine Count

1284531 bp

Cytosine Count

1281877 bp

Genome Length

3888545 bp

Protein-coding Genes

3809 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-sulfur cluster assembly factorDVK04_17345Not AvailablePositive3464945 - 346538815836.4
aldehyde dehydrogenaseDVK04_17350Not AvailableNegative3465724 - 346717250695.9
paai family thioesteraseDVK04_17355Not AvailableNegative3467241 - 346762413558.8
abc transporter atp-binding proteinDVK04_17360Not AvailableNegative3467704 - 346843225775.6
abc transporter atp-binding proteinDVK04_17365Not AvailableNegative3468429 - 346919327817.9
branched-chain amino acid abc transporter permeaseDVK04_17370Not AvailableNegative3469186 - 347118669959.4
branched-chain amino acid abc transporter substrate-binding proteinDVK04_17375Not AvailableNegative3471188 - 347237241080.9
llm class flavin-dependent oxidoreductaseDVK04_17380Not AvailableNegative3472552 - 347355636460.9
voc family proteinDVK04_17385Not AvailablePositive3473612 - 347413618450.1
monoamine oxidaseDVK04_17390Not AvailableNegative3474159 - 347462917544.6

Displaying genes 3431 – 3440 of 3864 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.