Haloferax sp. Atlit-105R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloferax

Description

Haloferax sp. Atlit-105R is a Gram-negative archaeon characterized by its rod-shaped morphology. This organism possesses flagella, which suggests it has the capability for motility, a trait that can be advantageous for survival in its natural habitat. The genome of Haloferax sp. Atlit-105R is represented by a single replicon, indicating a streamlined genetic organization typical of many archaeal species. The strain has been assigned the accession number QPLP00000000.1, which facilitates its identification in genomic databases and allows researchers to access its genetic information for further study. In terms of ecological significance, the motility conferred by flagella may play a crucial role in the organism's ability to navigate its environment, potentially aiding in nutrient acquisition and colonization of specific niches within saline ecosystems. This adaptability can be particularly important in extreme environments, where competition for resources may be intense. Thus, Haloferax sp. Atlit-105R exemplifies how specific morphological and genetic traits can contribute to the ecological success of microorganisms in challenging habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloferax
SpeciesHaloferax sp. Atlit-105R
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Haloferax sp. Atlit-105R
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloferax sp. Atlit-105R P_contig000091, whole genome shotgun

Gene Summary

Adenine Count

661261 bp

Thymine Count

660876 bp

Guanine Count

1284531 bp

Cytosine Count

1281877 bp

Genome Length

3888545 bp

Protein-coding Genes

3809 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permease subunitDVK04_15765Not AvailableNegative3112047 - 311417378044.8
peptide abc transporter substrate-binding proteinDVK04_15770Not AvailableNegative3114379 - 311646978500.6
hypothetical proteinDVK04_15775Not AvailablePositive3116683 - 31168746799.65
hypothetical proteinDVK04_15780Not AvailablePositive3117442 - 311850638609.2
glycoside hydrolase family 28 proteinDVK04_15785Not AvailablePositive3118603 - 312014155355.6
duf362 domain-containing proteinDVK04_15790Not AvailableNegative3120190 - 312156649022.9
gfo/idh/moca family oxidoreductaseDVK04_15795Not AvailableNegative3121591 - 312273943217.3
pectate lyaseDVK04_15800Not AvailablePositive3123225 - 312523171434.9
gfo/idh/moca family oxidoreductaseDVK04_15805Not AvailablePositive3125316 - 312642240928.9
iclr family transcriptional regulatorDVK04_15810Not AvailablePositive3126532 - 312729928504.9

Displaying genes 3121 – 3130 of 3864 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.