Haloferax sp. Atlit-105R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloferax

Description

Haloferax sp. Atlit-105R is a Gram-negative archaeon characterized by its rod-shaped morphology. This organism possesses flagella, which suggests it has the capability for motility, a trait that can be advantageous for survival in its natural habitat. The genome of Haloferax sp. Atlit-105R is represented by a single replicon, indicating a streamlined genetic organization typical of many archaeal species. The strain has been assigned the accession number QPLP00000000.1, which facilitates its identification in genomic databases and allows researchers to access its genetic information for further study. In terms of ecological significance, the motility conferred by flagella may play a crucial role in the organism's ability to navigate its environment, potentially aiding in nutrient acquisition and colonization of specific niches within saline ecosystems. This adaptability can be particularly important in extreme environments, where competition for resources may be intense. Thus, Haloferax sp. Atlit-105R exemplifies how specific morphological and genetic traits can contribute to the ecological success of microorganisms in challenging habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloferax
SpeciesHaloferax sp. Atlit-105R
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Haloferax sp. Atlit-105R
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloferax sp. Atlit-105R P_contig000091, whole genome shotgun

Gene Summary

Adenine Count

661261 bp

Thymine Count

660876 bp

Guanine Count

1284531 bp

Cytosine Count

1281877 bp

Genome Length

3888545 bp

Protein-coding Genes

3809 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flap endonuclease-1DVK04_08855Not AvailablePositive1699128 - 170010836323.8
transcriptional initiation protein tatDVK04_08860Not AvailablePositive1700175 - 170152150021.5
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeDVK04_08865Not AvailableNegative1701531 - 170288349075.3
ai-2e family transporterDVK04_08870Not AvailablePositive1703105 - 170437346106.3
padr family transcriptional regulatorDVK04_08875Not AvailableNegative1704388 - 170467511364.3
hypothetical proteinDVK04_08880Not AvailablePositive1705575 - 170628525819.9
flagella cluster proteinDVK04_08885Not AvailablePositive1706344 - 17065778675.13
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldDVK04_08890Not AvailableNegative1706659 - 170755231367.8
hypothetical proteinDVK04_08895Not AvailableNegative1707652 - 170822119562.0
hypothetical proteinDVK04_08900Not AvailableNegative1708221 - 170852010705.6

Displaying genes 1761 – 1770 of 3864 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.