Rhodovulum sp. 12E13

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Rhodovulum

Description

Rhodovulum sp. 12E13 is a Gram-negative bacterium characterized by having a single replicon. This classification as Gram-negative indicates that it possesses a thin peptidoglycan layer situated between an inner cytoplasmic membrane and an outer membrane, which is a hallmark of many bacteria within this group. The presence of only one replicon suggests a streamlined genetic organization, which may influence its replication and cell division processes. The strain is cataloged under the accession number QPLK00000000.1, providing a reference point for researchers seeking to access genomic information regarding Rhodovulum sp. 12E13. The genomic data associated with this accession can provide insights into its metabolic pathways, ecological roles, and potential applications. Rhodovulum species are typically known for their capabilities in photosynthesis and nitrogen fixation, suggesting that Rhodovulum sp. 12E13 may play a role in nutrient cycling within its environment. Its Gram-negative nature could also indicate its adaptability to various ecological niches, potentially contributing to its survival in diverse habitats. In summary, Rhodovulum sp. 12E13 is a Gram-negative bacterium with a singular replicon, highlighting its simple genetic architecture. Its ecological role, potentially linked to photosynthesis and nitrogen fixation, underscores the importance of such microorganisms in maintaining environmental balance and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusRhodovulum
SpeciesRhodovulum sp. 12E13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodovulum sp. 12E13 Scaffold127, whole genome shotgun sequence.

Gene Summary

Adenine Count

659499 bp

Thymine Count

664191 bp

Guanine Count

1605971 bp

Cytosine Count

1599924 bp

Genome Length

4529615 bp

Protein-coding Genes

4079 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
brp/blh family beta-carotene 15,15'-monooxygenaseDLJ49_16625Not AvailableNegative3604610 - 360549430151.0
lycopene cyclaseDLJ49_16630Not AvailableNegative3605491 - 360659439098.4
squalene/phytoene synthase family proteinDLJ49_16635Not AvailableNegative3606587 - 360745029851.1
phytoene desaturaseDLJ49_16640Not AvailableNegative3607447 - 360892554256.7
rhodopsinDLJ49_16645Not AvailableNegative3609051 - 360995633713.7
pas domain s-box proteinDLJ49_16650Not AvailablePositive3610124 - 361138946276.0
response regulatorDLJ49_16655Not AvailablePositive3611337 - 361183118219.1
pas domain s-box proteinDLJ49_16660Not AvailableNegative3611828 - 361373269069.1
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeDLJ49_16670Not AvailableNegative3616728 - 361810749993.5
taurine abc transporter substrate-binding proteinDLJ49_16675Not AvailablePositive3618368 - 361936934967.4

Displaying genes 3301 – 3310 of 4160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.