Rhodovulum sp. 12E13

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Rhodovulum

Description

Rhodovulum sp. 12E13 is a Gram-negative bacterium characterized by having a single replicon. This classification as Gram-negative indicates that it possesses a thin peptidoglycan layer situated between an inner cytoplasmic membrane and an outer membrane, which is a hallmark of many bacteria within this group. The presence of only one replicon suggests a streamlined genetic organization, which may influence its replication and cell division processes. The strain is cataloged under the accession number QPLK00000000.1, providing a reference point for researchers seeking to access genomic information regarding Rhodovulum sp. 12E13. The genomic data associated with this accession can provide insights into its metabolic pathways, ecological roles, and potential applications. Rhodovulum species are typically known for their capabilities in photosynthesis and nitrogen fixation, suggesting that Rhodovulum sp. 12E13 may play a role in nutrient cycling within its environment. Its Gram-negative nature could also indicate its adaptability to various ecological niches, potentially contributing to its survival in diverse habitats. In summary, Rhodovulum sp. 12E13 is a Gram-negative bacterium with a singular replicon, highlighting its simple genetic architecture. Its ecological role, potentially linked to photosynthesis and nitrogen fixation, underscores the importance of such microorganisms in maintaining environmental balance and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusRhodovulum
SpeciesRhodovulum sp. 12E13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodovulum sp. 12E13 Scaffold127, whole genome shotgun sequence.

Gene Summary

Adenine Count

659499 bp

Thymine Count

664191 bp

Guanine Count

1605971 bp

Cytosine Count

1599924 bp

Genome Length

4529615 bp

Protein-coding Genes

4079 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDLJ49_09510Not AvailableNegative2092743 - 209308112071.5
sdr family nad(p)-dependent oxidoreductaseDLJ49_09515Not AvailableNegative2093081 - 209381824873.0
duf2062 domain-containing proteinDLJ49_09520Not AvailableNegative2093939 - 209461624948.3
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseDLJ49_09525Not AvailableNegative2094628 - 209682381946.0
dna-directed rna polymerase subunit omegaDLJ49_09530Not AvailableNegative2096874 - 209723013393.7
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDLJ49_09535Not AvailableNegative2097261 - 209789922377.7
nyn domain-containing proteinDLJ49_09540Not AvailablePositive2097997 - 209859923296.8
deda family proteinDLJ49_09545Not AvailablePositive2098663 - 209915717539.4
cytochrome cDLJ49_09550Not AvailableNegative2099154 - 209964517414.5
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseDLJ49_09555Not AvailablePositive2099799 - 210075534551.6

Displaying genes 1911 – 1920 of 4160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.