Pseudidiomarina tainanensis strain 86_o

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina tainanensis strain 86_o is characterized by a single replicon, indicating a streamlined genomic structure. This strain is cataloged under the accession number QPJA00000000.1, which facilitates its identification and retrieval from genomic databases. The unicellular organism is part of the broader Pseudidiomarina genus, known for its ecological significance in marine environments. While specific traits such as metabolic capabilities or ecological interactions are not provided, the existence of a single replicon suggests a potential for efficient replication and adaptation to its ecological niche. In summary, Pseudidiomarina tainanensis strain 86_o, with its singular replicon and associated genomic data, exemplifies a model for studying microbial diversity and function in marine ecosystems. Its streamlined genomic architecture may enable it to thrive in specific ecological contexts, although further research is needed to elucidate its precise biological roles and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina tainanensis
Strainstrain 86_o

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina tainanensis strain 86_o Ga0227265_146, whole

Gene Summary

Adenine Count

726544 bp

Thymine Count

724557 bp

Guanine Count

670870 bp

Cytosine Count

660497 bp

Genome Length

2782892 bp

Protein-coding Genes

2584 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe-mn family superoxide dismutaseDFO79_101287Not AvailableNegative293587 - 29416821241.5
monothiol glutaredoxinDFO79_101288Not AvailablePositive294411 - 29474612263.8
peroxiredoxin (alkyl hydroperoxide reductase subunit c)DFO79_101289Not AvailablePositive294773 - 29537822133.4
atp-dependent rna helicase dbpaDFO79_101290Not AvailableNegative295486 - 29687449442.4
cytosine deaminaseDFO79_101291Not AvailablePositive297008 - 29744515906.2
putative membrane proteinDFO79_101292Not AvailableNegative297442 - 29804422665.6
rnase tDFO79_101293Not AvailableNegative298098 - 29876924200.8
lactoylglutathione lyaseDFO79_101294Not AvailableNegative298766 - 29917014930.7
dna-(apurinic or apyrimidinic site) lyase /endonuclease iiiDFO79_101295Not AvailableNegative299172 - 29981323617.6
electron transport complex protein rnfeDFO79_101296Not AvailableNegative299819 - 30050824969.2

Displaying genes 291 – 300 of 2644 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.