Pseudidiomarina tainanensis strain 86_o

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina tainanensis strain 86_o is characterized by a single replicon, indicating a streamlined genomic structure. This strain is cataloged under the accession number QPJA00000000.1, which facilitates its identification and retrieval from genomic databases. The unicellular organism is part of the broader Pseudidiomarina genus, known for its ecological significance in marine environments. While specific traits such as metabolic capabilities or ecological interactions are not provided, the existence of a single replicon suggests a potential for efficient replication and adaptation to its ecological niche. In summary, Pseudidiomarina tainanensis strain 86_o, with its singular replicon and associated genomic data, exemplifies a model for studying microbial diversity and function in marine ecosystems. Its streamlined genomic architecture may enable it to thrive in specific ecological contexts, although further research is needed to elucidate its precise biological roles and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina tainanensis
Strainstrain 86_o

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina tainanensis strain 86_o Ga0227265_146, whole

Gene Summary

Adenine Count

726544 bp

Thymine Count

724557 bp

Guanine Count

670870 bp

Cytosine Count

660497 bp

Genome Length

2782892 bp

Protein-coding Genes

2584 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase subunit 1DFO79_11851Not AvailablePositive2389960 - 239154659028.2
cytochrome c oxidase assembly protein subunit 11DFO79_11852Not AvailablePositive2391549 - 239214521855.3
cytochrome c oxidase subunit 3DFO79_11853Not AvailablePositive2392155 - 239303632863.2
duf2909 family proteinDFO79_11854Not AvailableNegative2393064 - 23932797841.42
cytochrome oxidase assembly protein shyy1DFO79_11855Not AvailablePositive2393306 - 239405527562.5
hypothetical proteinDFO79_11856Not AvailablePositive2394052 - 239459419514.0
cytochrome c oxidase assembly protein subunit 15DFO79_11857Not AvailablePositive2394599 - 239557335136.2
protoheme ix farnesyltransferaseDFO79_11858Not AvailablePositive2395603 - 239654434470.5
protein sco1/2DFO79_11859Not AvailablePositive2396569 - 239718622715.3
peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family)DFO79_11860Not AvailableNegative2397209 - 239827639942.0

Displaying genes 2241 – 2250 of 2644 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.