Ciceribacter lividus strain DSM 25528

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ciceribacter

Description

Ciceribacter lividus strain DSM 25528 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives at an optimal temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. The genomic analysis of Ciceribacter lividus reveals a single replicon, which implies a streamlined genetic structure that may contribute to its adaptability in various habitats. The accession number for this strain is QPIX00000000.1, which provides a unique identifier for researchers seeking to access its genomic data. Understanding the traits of Ciceribacter lividus can offer insights into its ecological role. As an aerobic organism, it likely participates in processes that require oxygen, such as the decomposition of organic matter in soil or aquatic environments. Its mesophilic nature suggests that it is well-suited to temperate climates, where it may contribute to nutrient cycling and support various microbial communities. Overall, the characteristics of Ciceribacter lividus strain DSM 25528 underscore its potential importance in ecological processes and microbial interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusCiceribacter
SpeciesCiceribacter lividus
Strainstrain DSM 25528

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ciceribacter lividus strain DSM 25528 Ga0244560_132, whole genome

Gene Summary

Adenine Count

827830 bp

Thymine Count

835115 bp

Guanine Count

1434553 bp

Cytosine Count

1423098 bp

Genome Length

4521451 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catechol 2,3-dioxygenaseDFR48_11388Not AvailablePositive4058900 - 405979332400.6
3-(3-hydroxy-phenyl)propionate hydroxylaseDFR48_11389Not AvailablePositive4059831 - 406140857221.5
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayDFR48_11390Not AvailablePositive4061503 - 406234830602.6
hypothetical proteinDFR48_11391Not AvailablePositive4062356 - 40624754395.54
dde superfamily endonucleaseDFR48_11392Not AvailableNegative4062462 - 406300420765.1
hypothetical proteinDFR48_11393Not AvailableNegative4063011 - 406329211137.6
invasion protein ialbDFR48_11394Not AvailableNegative4063379 - 406397520107.2
hemolysin activation/secretion proteinDFR48_11395Not AvailableNegative4064078 - 406581760341.6
filamentous hemagglutinin family proteinDFR48_11396Not AvailableNegative4065835 - 4070964166379.0
arac-like dna-binding proteinDFR48_11397Not AvailablePositive4071293 - 407230937607.6

Displaying genes 3941 – 3950 of 4336 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.