Ciceribacter lividus strain DSM 25528

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ciceribacter

Description

Ciceribacter lividus strain DSM 25528 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives at an optimal temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. The genomic analysis of Ciceribacter lividus reveals a single replicon, which implies a streamlined genetic structure that may contribute to its adaptability in various habitats. The accession number for this strain is QPIX00000000.1, which provides a unique identifier for researchers seeking to access its genomic data. Understanding the traits of Ciceribacter lividus can offer insights into its ecological role. As an aerobic organism, it likely participates in processes that require oxygen, such as the decomposition of organic matter in soil or aquatic environments. Its mesophilic nature suggests that it is well-suited to temperate climates, where it may contribute to nutrient cycling and support various microbial communities. Overall, the characteristics of Ciceribacter lividus strain DSM 25528 underscore its potential importance in ecological processes and microbial interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusCiceribacter
SpeciesCiceribacter lividus
Strainstrain DSM 25528

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ciceribacter lividus strain DSM 25528 Ga0244560_132, whole genome

Gene Summary

Adenine Count

827830 bp

Thymine Count

835115 bp

Guanine Count

1434553 bp

Cytosine Count

1423098 bp

Genome Length

4521451 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter membrane protein 1 (paat family)DFR48_106263Not AvailablePositive2678379 - 267904123688.9
amino acid abc transporter membrane protein 2 (paat family)DFR48_106264Not AvailablePositive2679046 - 267971124078.1
amino acid abc transporter atp-binding protein (paat family)DFR48_106265Not AvailablePositive2679723 - 268049328444.0
reactive intermediate/imine deaminaseDFR48_106266Not AvailablePositive2680513 - 268090214157.9
iclr family transcriptional regulatorDFR48_106267Not AvailablePositive2680922 - 268173130501.6
acyl carrier proteinDFR48_106268Not AvailableNegative2681980 - 26822349442.38
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)DFR48_106269Not AvailableNegative2682231 - 268342741287.9
pyruvate dehydrogenase e1 component beta subunit/2-oxoisovalerate dehydrogenase e1 componentDFR48_106270Not AvailableNegative2683424 - 268543672874.3
acetyl-coa synthetaseDFR48_106271Not AvailableNegative2685433 - 268718163966.7
dna-binding transcriptional regulator lsrr (deor family)DFR48_106272Not AvailableNegative2687602 - 268856734009.0

Displaying genes 2611 – 2620 of 4336 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.