Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Ciceribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Ciceribacter |
| Species | Ciceribacter lividus |
| Strain | strain DSM 25528 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827830 bp
Thymine Count
835115 bp
Guanine Count
1434553 bp
Cytosine Count
1423098 bp
Genome Length
4521451 bp
Protein-coding Genes
4248 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bira family biotin operon repressor/biotin-[acetyl-coa-carboxylase] ligase | DFR48_102319 | Not Available | Positive | 1123525 - 1124292 | 27246.7 |
| ribonuclease j | DFR48_102320 | Not Available | Positive | 1124310 - 1125977 | 60193.2 |
| methylmalonyl-coa epimerase | DFR48_102321 | Not Available | Positive | 1126051 - 1126455 | 14171.1 |
| putative secreted protein | DFR48_102322 | Not Available | Positive | 1126614 - 1126883 | 9832.07 |
| prolyl-trna synthetase | DFR48_102323 | Not Available | Positive | 1127428 - 1128750 | 49243.9 |
| lipoprotein-releasing system permease protein | DFR48_102324 | Not Available | Positive | 1128771 - 1130078 | 46819.5 |
| lipoprotein-releasing system atp-binding protein | DFR48_102325 | Not Available | Positive | 1130093 - 1130782 | 24552.5 |
| dna polymerase-3 subunit alpha | DFR48_102326 | Not Available | Positive | 1131206 - 1134703 | 129231.0 |
| l,d-transpeptidase-like protein | DFR48_102327 | Not Available | Negative | 1134734 - 1135978 | 44828.7 |
| dna polymerase-4 | DFR48_102328 | Not Available | Negative | 1136256 - 1137539 | 47479.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
