Ciceribacter lividus strain DSM 25528

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ciceribacter

Description

Ciceribacter lividus strain DSM 25528 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives at an optimal temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. The genomic analysis of Ciceribacter lividus reveals a single replicon, which implies a streamlined genetic structure that may contribute to its adaptability in various habitats. The accession number for this strain is QPIX00000000.1, which provides a unique identifier for researchers seeking to access its genomic data. Understanding the traits of Ciceribacter lividus can offer insights into its ecological role. As an aerobic organism, it likely participates in processes that require oxygen, such as the decomposition of organic matter in soil or aquatic environments. Its mesophilic nature suggests that it is well-suited to temperate climates, where it may contribute to nutrient cycling and support various microbial communities. Overall, the characteristics of Ciceribacter lividus strain DSM 25528 underscore its potential importance in ecological processes and microbial interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusCiceribacter
SpeciesCiceribacter lividus
Strainstrain DSM 25528

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ciceribacter lividus strain DSM 25528 Ga0244560_132, whole genome

Gene Summary

Adenine Count

827830 bp

Thymine Count

835115 bp

Guanine Count

1434553 bp

Cytosine Count

1423098 bp

Genome Length

4521451 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arsr family transcriptional regulatorDFR48_102264Not AvailableNegative1069199 - 106954312607.3
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)DFR48_102265Not AvailablePositive1069644 - 107040226631.8
unspecific monooxygenaseDFR48_102266Not AvailableNegative1070457 - 107170447409.9
gamma-glutamyltransferase 1DFR48_102267Not AvailableNegative1071761 - 107351861739.7
diguanylate cyclase (ggdef)-like proteinDFR48_102268Not AvailableNegative1073678 - 107494045598.4
atp-dependent clp protease proteolytic subunit clppDFR48_102269Not AvailablePositive1075430 - 107606223411.3
atp-dependent clp protease atp-binding subunit clpxDFR48_102270Not AvailablePositive1076364 - 107764146795.3
atp-dependent proteinaseDFR48_102271Not AvailablePositive1078089 - 108050989159.0
nucleoid protein hbsDFR48_102272Not AvailablePositive1080715 - 10809909348.03
s-adenosylmethionine uptake transporterDFR48_102274Not AvailablePositive1081449 - 108234831673.5

Displaying genes 1091 – 1100 of 4336 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.