Ciceribacter lividus strain DSM 25528

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ciceribacter

Description

Ciceribacter lividus strain DSM 25528 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives at an optimal temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate environmental conditions. The genomic analysis of Ciceribacter lividus reveals a single replicon, which implies a streamlined genetic structure that may contribute to its adaptability in various habitats. The accession number for this strain is QPIX00000000.1, which provides a unique identifier for researchers seeking to access its genomic data. Understanding the traits of Ciceribacter lividus can offer insights into its ecological role. As an aerobic organism, it likely participates in processes that require oxygen, such as the decomposition of organic matter in soil or aquatic environments. Its mesophilic nature suggests that it is well-suited to temperate climates, where it may contribute to nutrient cycling and support various microbial communities. Overall, the characteristics of Ciceribacter lividus strain DSM 25528 underscore its potential importance in ecological processes and microbial interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusCiceribacter
SpeciesCiceribacter lividus
Strainstrain DSM 25528

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ciceribacter lividus strain DSM 25528 Ga0244560_132, whole genome

Gene Summary

Adenine Count

827830 bp

Thymine Count

835115 bp

Guanine Count

1434553 bp

Cytosine Count

1423098 bp

Genome Length

4521451 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette subfamily f protein 3DFR48_102164Not AvailableNegative972701 - 97458768400.8
diguanylate cyclase (ggdef)-like proteinDFR48_102165Not AvailableNegative974718 - 97577937831.8
putative damage-inducible protein dinbDFR48_102166Not AvailableNegative975935 - 97644419252.9
glutathione s-transferaseDFR48_102167Not AvailablePositive976591 - 97727425481.4
pbp family phospholipid-binding proteinDFR48_102168Not AvailableNegative977281 - 97782618540.6
arac family transcriptional regulatorDFR48_102169Not AvailableNegative977869 - 97873530775.0
nucleoside diphosphate kinaseDFR48_102170Not AvailablePositive978907 - 97932915278.3
hypothetical proteinDFR48_102171Not AvailableNegative979423 - 97994418785.5
putative rna-binding zn ribbon-like proteinDFR48_102172Not AvailableNegative979941 - 98048920343.2
amino acid/amide abc transporter membrane protein 1 (haat family)DFR48_102173Not AvailablePositive980554 - 98145031538.3

Displaying genes 991 – 1000 of 4336 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.