Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | DVG78_00300 | Not Available | Negative | 69500 - 70807 | 48047.9 |
| uma2 family endonuclease | DVG78_00305 | Not Available | Negative | 70858 - 71496 | 24425.1 |
| uma2 family endonuclease | DVG78_00310 | Not Available | Negative | 71453 - 72028 | 22129.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DVG78_00315 | Not Available | Negative | 72035 - 73204 | 42692.6 |
| lysophospholipase | DVG78_00320 | Not Available | Positive | 73480 - 74262 | 28949.4 |
| glycoside hydrolase family 95 protein | DVG78_00325 | Not Available | Positive | 74301 - 76808 | 92979.4 |
| doxx family protein | DVG78_00330 | Not Available | Positive | 76881 - 77300 | 15500.4 |
| dihydropteroate synthase | DVG78_00335 | Not Available | Negative | 77355 - 78191 | 30660.2 |
| duf1599 domain-containing protein | DVG78_00340 | Not Available | Positive | 78315 - 78866 | 21273.6 |
| hypothetical protein | DVG78_00345 | Not Available | Positive | 78933 - 79124 | 7702.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
