Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20/alpha crystallin family protein | DVG78_04490 | Not Available | Negative | 1058824 - 1059255 | 15912.8 |
| rdd family protein | DVG78_04495 | Not Available | Positive | 1059781 - 1060290 | 18003.7 |
| threonine aldolase | DVG78_04500 | Not Available | Positive | 1060385 - 1061395 | 37002.5 |
| hypothetical protein | DVG78_04505 | Not Available | Negative | 1061761 - 1063077 | 50580.3 |
| duf502 domain-containing protein | DVG78_04510 | Not Available | Positive | 1063373 - 1063966 | 22076.4 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DVG78_04515 | Not Available | Negative | 1063996 - 1065210 | 45544.8 |
| glycosyltransferase | DVG78_04520 | Not Available | Negative | 1065312 - 1066076 | 29135.0 |
| colanic acid biosynthesis acetyltransferase wcaf | DVG78_04525 | Not Available | Negative | 1066158 - 1066733 | 21647.4 |
| glycosyltransferase family 2 protein | DVG78_04530 | Not Available | Negative | 1066675 - 1067610 | 37109.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DVG78_04535 | Not Available | Positive | 1067781 - 1069016 | 45122.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
