Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase | DVG78_04385 | Not Available | Positive | 1023135 - 1024646 | 56706.7 |
| glycoside hydrolase family 29 | DVG78_04390 | Not Available | Positive | 1024701 - 1026098 | 53317.9 |
| mandelate racemase | DVG78_04395 | Not Available | Positive | 1026133 - 1027359 | 45318.6 |
| sdr family nad(p)-dependent oxidoreductase | DVG78_04400 | Not Available | Positive | 1027372 - 1028136 | 27274.8 |
| l-rhamnose mutarotase | DVG78_04405 | Not Available | Positive | 1028142 - 1028498 | 13789.7 |
| l-fucose:h+ symporter permease | DVG78_04410 | Not Available | Positive | 1028486 - 1029730 | 44999.3 |
| alpha-l-fucosidase | DVG78_04415 | Not Available | Positive | 1029747 - 1031465 | 64625.9 |
| tonb-dependent receptor | DVG78_04420 | Not Available | Positive | 1031886 - 1034903 | 108140.0 |
| ragb/susd family nutrient uptake outer membrane protein | DVG78_04425 | Not Available | Positive | 1034930 - 1036417 | 55133.5 |
| fad-dependent oxidoreductase | DVG78_04435 | Not Available | Positive | 1037655 - 1039457 | 66822.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
