Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DVG78_04285 | Not Available | Negative | 991001 - 992479 | 55125.7 |
| susc/raga family tonb-linked outer membrane protein | DVG78_04290 | Not Available | Negative | 992495 - 995962 | 127313.0 |
| fecr family protein | DVG78_04295 | Not Available | Negative | 996125 - 997135 | 37902.5 |
| rna polymerase sigma-70 factor | DVG78_04300 | Not Available | Negative | 997168 - 997725 | 22017.2 |
| alpha-l-rhamnosidase | DVG78_04305 | Not Available | Negative | 997923 - 1000766 | 106478.0 |
| acyl-coa desaturase | DVG78_04310 | Not Available | Negative | 1000959 - 1002071 | 42380.1 |
| hypothetical protein | DVG78_04315 | Not Available | Positive | 1002805 - 1003062 | 9787.56 |
| glucosamine-6-phosphate deaminase | DVG78_04320 | Not Available | Negative | 1003278 - 1004027 | 27289.7 |
| gfo/idh/moca family oxidoreductase | DVG78_04325 | Not Available | Negative | 1004068 - 1005510 | 53999.7 |
| dna mismatch repair protein muts | DVG78_04330 | Not Available | Positive | 1005666 - 1008386 | 102693.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
