Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DVG78_02680 | Not Available | Negative | 622961 - 625954 | 109316.0 |
| fecr family protein | DVG78_02685 | Not Available | Negative | 626515 - 627609 | 41390.6 |
| sigma-70 family rna polymerase sigma factor | DVG78_02690 | Not Available | Negative | 627633 - 628244 | 23925.5 |
| hypothetical protein | DVG78_02695 | Not Available | Negative | 628520 - 631006 | 91922.9 |
| ragb/susd family nutrient uptake outer membrane protein | DVG78_02700 | Not Available | Negative | 631079 - 632791 | 64391.5 |
| susc/raga family tonb-linked outer membrane protein | DVG78_02705 | Not Available | Negative | 632811 - 636212 | 126387.0 |
| fecr family protein | DVG78_02710 | Not Available | Negative | 636401 - 637504 | 41803.9 |
| sigma-70 family rna polymerase sigma factor | DVG78_02715 | Not Available | Negative | 637583 - 638176 | 23074.7 |
| glycoside hydrolase family 88 protein | DVG78_02720 | Not Available | Negative | 638330 - 639439 | 42450.6 |
| licheninase | DVG78_02725 | Not Available | Negative | 639491 - 640999 | 56967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
