Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m19 | DVG78_02580 | Not Available | Positive | 588707 - 589798 | 40587.3 |
| susc/raga family tonb-linked outer membrane protein | DVG78_02585 | Not Available | Positive | 589967 - 593047 | 111277.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DVG78_02590 | Not Available | Positive | 593105 - 594658 | 56462.3 |
| uma2 family endonuclease | DVG78_02595 | Not Available | Negative | 594713 - 595321 | 23071.2 |
| duf5107 domain-containing protein | DVG78_02600 | Not Available | Positive | 595416 - 598373 | 113444.0 |
| hypothetical protein | DVG78_02605 | Not Available | Positive | 598455 - 601772 | 121547.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DVG78_02610 | Not Available | Positive | 601876 - 603846 | 73273.4 |
| polyphosphate kinase 1 | DVG78_02615 | Not Available | Positive | 604085 - 606397 | 89408.6 |
| alkaline phosphatase family protein | DVG78_02620 | Not Available | Positive | 606394 - 607650 | 47890.9 |
| hypothetical protein | DVG78_02625 | Not Available | Positive | 607747 - 608229 | 17457.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
