Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DVG78_26055 | Not Available | Positive | 6282787 - 6284565 | 67482.0 |
| mandelate racemase/muconate lactonizing enzyme family protein | DVG78_26060 | Not Available | Positive | 6284709 - 6285923 | 45037.7 |
| alginate lyase | DVG78_26065 | Not Available | Positive | 6285954 - 6287138 | 45788.9 |
| duf4962 domain-containing protein | DVG78_26070 | Not Available | Positive | 6287187 - 6289073 | 69921.8 |
| hypothetical protein | DVG78_26075 | Not Available | Positive | 6289140 - 6290612 | 55532.1 |
| yhs domain protein | DVG78_26080 | Not Available | Negative | 6290631 - 6291074 | 16668.7 |
| hypothetical protein | DVG78_26085 | Not Available | Positive | 6291328 - 6292956 | 61295.3 |
| porin | DVG78_26090 | Not Available | Negative | 6293065 - 6294309 | 46787.1 |
| arac family transcriptional regulator | DVG78_26095 | Not Available | Negative | 6294559 - 6295521 | 36778.3 |
| hypothetical protein | DVG78_26100 | Not Available | Negative | 6295496 - 6297151 | 60672.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
