Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2795 domain-containing protein | DVG78_25995 | Not Available | Positive | 6265691 - 6265912 | 8668.77 |
| glucuronyl hydrolase | DVG78_26010 | Not Available | Positive | 6266945 - 6268111 | 44262.4 |
| sigma-70 family rna polymerase sigma factor | DVG78_26015 | Not Available | Positive | 6268182 - 6268796 | 24473.6 |
| fecr family protein | DVG78_26020 | Not Available | Positive | 6268889 - 6269980 | 41630.4 |
| susc/raga family tonb-linked outer membrane protein | DVG78_26025 | Not Available | Positive | 6270102 - 6273509 | 126150.0 |
| ragb/susd family nutrient uptake outer membrane protein | DVG78_26030 | Not Available | Positive | 6273542 - 6275155 | 60477.5 |
| duf1080 domain-containing protein | DVG78_26035 | Not Available | Positive | 6275404 - 6276279 | 33414.0 |
| duf4962 domain-containing protein | DVG78_26040 | Not Available | Positive | 6276248 - 6278113 | 69172.8 |
| dehydrogenase | DVG78_26045 | Not Available | Positive | 6278120 - 6278929 | 30208.8 |
| tonb-dependent receptor | DVG78_26050 | Not Available | Positive | 6279574 - 6282759 | 117943.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
