Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | DVG78_02480 | Not Available | Positive | 563444 - 566020 | 95078.5 |
| sugar phosphate isomerase/epimerase | DVG78_02485 | Not Available | Positive | 566128 - 567186 | 39373.5 |
| sdr family nad(p)-dependent oxidoreductase | DVG78_02490 | Not Available | Positive | 567217 - 568002 | 27487.3 |
| t9ss c-terminal target domain-containing protein | DVG78_02495 | Not Available | Negative | 568089 - 571010 | 109061.0 |
| hypothetical protein | DVG78_02500 | Not Available | Positive | 571323 - 572489 | 43736.9 |
| rna polymerase sigma factor | DVG78_02505 | Not Available | Positive | 572640 - 573101 | 17711.2 |
| t9ss c-terminal target domain-containing protein | DVG78_02510 | Not Available | Positive | 573983 - 576649 | 99156.5 |
| peptidase c1 | DVG78_02515 | Not Available | Positive | 576776 - 577885 | 42779.6 |
| duf962 domain-containing protein | DVG78_02520 | Not Available | Positive | 578001 - 578465 | 17614.1 |
| lactate 2-monooxygenase | DVG78_02525 | Not Available | Positive | 578559 - 579815 | 45490.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
