Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DVG78_23005 | Not Available | Positive | 5599080 - 5599538 | 17316.4 |
| hypothetical protein | DVG78_23010 | Not Available | Positive | 5599640 - 5600032 | 15620.0 |
| transglutaminase family protein | DVG78_23015 | Not Available | Positive | 5600108 - 5600902 | 29772.7 |
| sigma-70 family rna polymerase sigma factor | DVG78_23020 | Not Available | Negative | 5600917 - 5601486 | 22168.6 |
| pa2169 family four-helix-bundle protein | DVG78_23025 | Not Available | Negative | 5601547 - 5602041 | 18242.6 |
| hypothetical protein | DVG78_23030 | Not Available | Positive | 5602231 - 5602500 | 9763.71 |
| ytxh domain-containing protein | DVG78_23035 | Not Available | Positive | 5602531 - 5602803 | 10319.1 |
| response regulator | DVG78_23040 | Not Available | Negative | 5603078 - 5603443 | 13257.4 |
| ytxh domain-containing protein | DVG78_23045 | Not Available | Positive | 5603701 - 5604012 | 11300.3 |
| phage holin family protein | DVG78_23050 | Not Available | Positive | 5604091 - 5604456 | 13319.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
