Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | DVG78_22355 | Not Available | Negative | 5454951 - 5455961 | 35393.2 |
| hypothetical protein | DVG78_22360 | Not Available | Positive | 5456036 - 5456221 | 7479.97 |
| n-acetylgalactosamine 6-sulfate sulfatase | DVG78_22365 | Not Available | Positive | 5456278 - 5457618 | 50588.7 |
| duf4976 domain-containing protein | DVG78_22370 | Not Available | Positive | 5457702 - 5459234 | 58470.5 |
| heparan n-sulfatase | DVG78_22375 | Not Available | Positive | 5459270 - 5460676 | 53296.9 |
| tigr00159 family protein | DVG78_22380 | Not Available | Negative | 5460680 - 5461483 | 30054.0 |
| deda family protein | DVG78_22385 | Not Available | Negative | 5461535 - 5462173 | 23951.7 |
| abc transporter atp-binding protein | DVG78_22390 | Not Available | Negative | 5462276 - 5464144 | 70010.7 |
| chloride channel protein | DVG78_22395 | Not Available | Negative | 5464204 - 5465559 | 49492.5 |
| dna-binding response regulator | DVG78_22400 | Not Available | Negative | 5465747 - 5466394 | 24442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
