Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DVG78_21905 | Not Available | Negative | 5347714 - 5348811 | 40821.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DVG78_21910 | Not Available | Negative | 5348926 - 5350194 | 46915.9 |
| hypothetical protein | DVG78_21915 | Not Available | Positive | 5350424 - 5350780 | 12867.8 |
| o-antigen ligase domain-containing protein | DVG78_21920 | Not Available | Negative | 5350806 - 5352068 | 48458.8 |
| glycosyltransferase family 1 protein | DVG78_21925 | Not Available | Negative | 5352132 - 5353268 | 43524.9 |
| sam-dependent methyltransferase | DVG78_21930 | Not Available | Negative | 5353272 - 5354033 | 29585.3 |
| glycosyltransferase | DVG78_21935 | Not Available | Negative | 5354185 - 5355231 | 40383.5 |
| acetylxylan esterase | DVG78_21940 | Not Available | Positive | 5355387 - 5356679 | 47643.1 |
| pspc domain-containing protein | DVG78_21945 | Not Available | Negative | 5356728 - 5356961 | 8669.77 |
| phosphotriesterase | DVG78_21950 | Not Available | Negative | 5357118 - 5358113 | 37251.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
