Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DVG78_21750 | Not Available | Negative | 5310663 - 5312393 | 65460.3 |
| susc/raga family tonb-linked outer membrane protein | DVG78_21755 | Not Available | Negative | 5312439 - 5316029 | 132281.0 |
| fecr family protein | DVG78_21760 | Not Available | Negative | 5316233 - 5317336 | 41132.2 |
| hypothetical protein | DVG78_21765 | Not Available | Negative | 5317526 - 5318134 | 24068.3 |
| hypothetical protein | DVG78_21770 | Not Available | Positive | 5318510 - 5319241 | 28508.6 |
| duf2911 domain-containing protein | DVG78_21775 | Not Available | Positive | 5319341 - 5319847 | 18723.6 |
| sugar phosphate isomerase/epimerase | DVG78_21780 | Not Available | Positive | 5320081 - 5321016 | 33711.0 |
| hypothetical protein | DVG78_21785 | Not Available | Positive | 5321241 - 5323298 | 77049.0 |
| hypothetical protein | DVG78_21790 | Not Available | Negative | 5323401 - 5324645 | 46226.6 |
| potassium transporter kefb | DVG78_21795 | Not Available | Negative | 5324704 - 5325042 | 12443.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
