Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone-dependent dehydrogenase | DVG78_21200 | Not Available | Positive | 5153350 - 5155575 | 80720.0 |
| 2-keto-3-deoxy-galactonokinase | DVG78_21205 | Not Available | Positive | 5155600 - 5156604 | 37358.0 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DVG78_21210 | Not Available | Positive | 5156601 - 5157242 | 23543.0 |
| mfs transporter | DVG78_21215 | Not Available | Positive | 5157239 - 5158543 | 48225.5 |
| trna epoxyqueuosine(34) reductase queg | DVG78_21220 | Not Available | Negative | 5158752 - 5159696 | 36219.1 |
| duf1311 domain-containing protein | DVG78_21225 | Not Available | Positive | 5159820 - 5160239 | 16104.7 |
| membrane dipeptidase | DVG78_21230 | Not Available | Positive | 5160277 - 5161500 | 45162.4 |
| hypothetical protein | DVG78_21235 | Not Available | Negative | 5161660 - 5161884 | 8618.38 |
| dna primase | DVG78_21240 | Not Available | Positive | 5161909 - 5163966 | 78131.0 |
| aminoglycoside phosphotransferase | DVG78_21245 | Not Available | Negative | 5163974 - 5164957 | 37655.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
