Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DVG78_18675 | Not Available | Positive | 4505643 - 4506767 | 41500.4 |
| sigma-70 family rna polymerase sigma factor | DVG78_18680 | Not Available | Positive | 4506870 - 4507460 | 23077.2 |
| fecr family protein | DVG78_18685 | Not Available | Positive | 4507645 - 4508742 | 41373.6 |
| tonb-dependent receptor | DVG78_18690 | Not Available | Positive | 4509207 - 4512491 | 121644.0 |
| ragb/susd family nutrient uptake outer membrane protein | DVG78_18695 | Not Available | Positive | 4512512 - 4514278 | 66324.3 |
| sugar phosphate isomerase/epimerase | DVG78_18700 | Not Available | Positive | 4514515 - 4515567 | 38973.9 |
| c-type cytochrome | DVG78_18705 | Not Available | Negative | 4515718 - 4516239 | 18755.6 |
| phospholipase c, phosphocholine-specific | DVG78_18710 | Not Available | Negative | 4516387 - 4518963 | 97582.7 |
| type ii toxin-antitoxin system vapc family toxin | DVG78_18720 | Not Available | Negative | 4519325 - 4519720 | 15305.5 |
| duf2281 domain-containing protein | DVG78_18725 | Not Available | Negative | 4519725 - 4519937 | 7938.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
