Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor protein lyts | DVG78_16620 | Not Available | Negative | 4014741 - 4015745 | 38506.1 |
| hypothetical protein | DVG78_16625 | Not Available | Negative | 4015923 - 4016414 | 17920.5 |
| gh3 auxin-responsive promoter | DVG78_16630 | Not Available | Negative | 4016614 - 4018191 | 60201.0 |
| 5'/3'-nucleotidase sure | DVG78_16635 | Not Available | Negative | 4018304 - 4019095 | 29002.6 |
| hypothetical protein | DVG78_16640 | Not Available | Negative | 4019284 - 4021572 | 86166.2 |
| cu(2+)-exporting atpase | DVG78_16645 | Not Available | Positive | 4021918 - 4024134 | 79647.5 |
| copper chaperone | DVG78_16650 | Not Available | Positive | 4024251 - 4024460 | 7603.08 |
| exo-alpha-sialidase | DVG78_16655 | Not Available | Positive | 4024757 - 4025902 | 42597.5 |
| duf4976 domain-containing protein | DVG78_16660 | Not Available | Positive | 4026026 - 4027540 | 58693.7 |
| hypothetical protein | DVG78_16665 | Not Available | Negative | 4027674 - 4028522 | 30269.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
