Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DVG78_01605 | Not Available | Positive | 360781 - 362313 | 57170.9 |
| hypothetical protein | DVG78_01610 | Not Available | Negative | 362413 - 362709 | 10826.7 |
| atp-grasp domain-containing protein | DVG78_01615 | Not Available | Positive | 363052 - 363984 | 35586.7 |
| susc/raga family tonb-linked outer membrane protein | DVG78_01620 | Not Available | Positive | 364295 - 367450 | 115537.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DVG78_01625 | Not Available | Positive | 367541 - 369025 | 55539.1 |
| hypothetical protein | DVG78_01630 | Not Available | Positive | 369051 - 371489 | 90281.1 |
| duf4238 domain-containing protein | DVG78_01635 | Not Available | Positive | 371838 - 372989 | 44526.4 |
| hypothetical protein | DVG78_01640 | Not Available | Negative | 373333 - 374010 | 26137.3 |
| hypothetical protein | DVG78_01645 | Not Available | Negative | 374086 - 374409 | 12636.6 |
| site-specific integrase | DVG78_01650 | Not Available | Positive | 374571 - 375884 | 51361.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
