Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | DVG78_16215 | Not Available | Positive | 3928020 - 3928466 | 16549.1 |
| duf58 domain-containing protein | DVG78_16220 | Not Available | Positive | 3928485 - 3929399 | 35551.6 |
| hypothetical protein | DVG78_16225 | Not Available | Positive | 3929453 - 3930607 | 44322.8 |
| hypothetical protein | DVG78_16230 | Not Available | Negative | 3930601 - 3930789 | 6954.69 |
| duf5009 domain-containing protein | DVG78_16235 | Not Available | Negative | 3930786 - 3931982 | 44614.3 |
| glycoside hydrolase | DVG78_16240 | Not Available | Negative | 3932001 - 3933110 | 42546.4 |
| alpha-amylase | DVG78_16245 | Not Available | Negative | 3933279 - 3935099 | 68899.7 |
| glycosyltransferase | DVG78_16250 | Not Available | Positive | 3935324 - 3936448 | 43334.7 |
| heme-copper oxidase subunit iii | DVG78_16255 | Not Available | Negative | 3936477 - 3937091 | 23428.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DVG78_16260 | Not Available | Negative | 3937116 - 3937928 | 29990.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
