Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DVG78_15915 | Not Available | Negative | 3856518 - 3857888 | 49743.8 |
| tonb-dependent receptor | DVG78_15920 | Not Available | Negative | 3857915 - 3861010 | 112837.0 |
| hypothetical protein | DVG78_15925 | Not Available | Negative | 3861465 - 3862661 | 45819.4 |
| type ii toxin-antitoxin system hica family toxin | DVG78_15930 | Not Available | Negative | 3862678 - 3862920 | 9124.3 |
| 2-oxoisovalerate dehydrogenase | DVG78_15935 | Not Available | Negative | 3862921 - 3863130 | 7868.45 |
| gmp synthase | DVG78_15940 | Not Available | Negative | 3863192 - 3864025 | 32190.8 |
| gfo/idh/moca family oxidoreductase | DVG78_15945 | Not Available | Negative | 3864215 - 3865360 | 42849.9 |
| sulfatase | DVG78_15950 | Not Available | Negative | 3865434 - 3867083 | 62752.9 |
| lps-assembly protein lptd | DVG78_15955 | Not Available | Positive | 3867254 - 3870049 | 103801.0 |
| asparagine synthetase b family protein | DVG78_15960 | Not Available | Negative | 3870046 - 3872019 | 75746.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
