Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 32 protein | DVG78_15255 | Not Available | Positive | 3705648 - 3707159 | 57584.8 |
| hypothetical protein | DVG78_15260 | Not Available | Negative | 3707234 - 3708022 | 29343.9 |
| rna polymerase sigma-70 factor | DVG78_15265 | Not Available | Positive | 3708275 - 3708961 | 27139.4 |
| duf4974 domain-containing protein | DVG78_15270 | Not Available | Positive | 3709033 - 3710037 | 38369.8 |
| susc/raga family tonb-linked outer membrane protein | DVG78_15275 | Not Available | Positive | 3710058 - 3713609 | 129841.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DVG78_15280 | Not Available | Positive | 3713637 - 3715160 | 55468.6 |
| 2-dehydro-3-deoxyglucarate aldolase | DVG78_15285 | Not Available | Positive | 3715189 - 3715962 | 27730.4 |
| gntp family permease | DVG78_15290 | Not Available | Positive | 3716022 - 3717461 | 50214.8 |
| 2-hydroxy-3-oxopropionate reductase | DVG78_15295 | Not Available | Positive | 3717537 - 3718397 | 29787.6 |
| mannonate dehydratase | DVG78_15300 | Not Available | Positive | 3718455 - 3719570 | 41543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
