Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator | DVG78_13020 | Not Available | Negative | 3147466 - 3147816 | 13434.6 |
| 3'-5' exonuclease | DVG78_13025 | Not Available | Positive | 3147938 - 3148459 | 19810.5 |
| tetr/acrr family transcriptional regulator | DVG78_13030 | Not Available | Positive | 3148551 - 3149105 | 21211.9 |
| mbl fold metallo-hydrolase | DVG78_13035 | Not Available | Positive | 3149188 - 3150300 | 42514.7 |
| nifu family protein | DVG78_13040 | Not Available | Negative | 3150344 - 3150607 | 9435.49 |
| iron-sulfur cluster carrier protein apbc | DVG78_13045 | Not Available | Negative | 3150644 - 3151750 | 39779.6 |
| pqq-dependent sugar dehydrogenase | DVG78_13050 | Not Available | Negative | 3151955 - 3153391 | 52916.1 |
| mfs transporter | DVG78_13055 | Not Available | Negative | 3153542 - 3154870 | 48023.0 |
| histidine kinase | DVG78_13060 | Not Available | Positive | 3155556 - 3156626 | 41038.4 |
| dna-binding response regulator | DVG78_13065 | Not Available | Positive | 3156684 - 3157463 | 30395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
