Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DVG78_12920 | Not Available | Negative | 3126320 - 3129436 | 114317.0 |
| atp-dependent zinc protease | DVG78_12925 | Not Available | Positive | 3129645 - 3130130 | 18356.6 |
| 30s ribosomal protein s6--l-glutamate ligase | DVG78_12930 | Not Available | Positive | 3130240 - 3131142 | 32362.8 |
| nudix hydrolase | DVG78_12935 | Not Available | Positive | 3131256 - 3131963 | 27391.0 |
| duf3667 domain-containing protein | DVG78_12940 | Not Available | Negative | 3131960 - 3132853 | 34965.5 |
| glycoside hydrolase family 5 protein | DVG78_12945 | Not Available | Positive | 3132957 - 3133973 | 38743.0 |
| sialate o-acetylesterase | DVG78_12950 | Not Available | Positive | 3134131 - 3136083 | 73480.5 |
| l-glyceraldehyde 3-phosphate reductase | DVG78_12955 | Not Available | Positive | 3136108 - 3137097 | 36635.0 |
| hypothetical protein | DVG78_12960 | Not Available | Positive | 3137311 - 3138504 | 44919.9 |
| fumarylacetoacetate hydrolase family protein | DVG78_12965 | Not Available | Positive | 3138567 - 3139178 | 22986.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
