Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydro-n-acetylmuramic acid kinase | DVG78_09330 | Not Available | Positive | 2273502 - 2274698 | 43550.4 |
| pdz domain-containing protein | DVG78_09335 | Not Available | Negative | 2274777 - 2276033 | 47568.0 |
| triose-phosphate isomerase | DVG78_09340 | Not Available | Positive | 2276283 - 2277047 | 27692.3 |
| hypothetical protein | DVG78_09345 | Not Available | Positive | 2277121 - 2278227 | 41231.8 |
| amidohydrolase | DVG78_09350 | Not Available | Negative | 2278287 - 2279060 | 29829.8 |
| alkaline phosphatase family protein | DVG78_09355 | Not Available | Negative | 2279087 - 2280400 | 50027.9 |
| class i sam-dependent methyltransferase | DVG78_09360 | Not Available | Positive | 2280579 - 2281313 | 28129.2 |
| diaminopimelate decarboxylase | DVG78_09365 | Not Available | Positive | 2281409 - 2282671 | 46363.1 |
| yebc/pmpr family dna-binding transcriptional regulator | DVG78_09370 | Not Available | Positive | 2282775 - 2283488 | 26844.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DVG78_09375 | Not Available | Negative | 2283668 - 2284579 | 34742.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
