Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DVG78_08925 | Not Available | Positive | 2183795 - 2184907 | 41726.6 |
| urease accessory protein | DVG78_08930 | Not Available | Positive | 2184912 - 2185526 | 21866.2 |
| hypothetical protein | DVG78_08935 | Not Available | Positive | 2185546 - 2185773 | 8830.49 |
| bifunctional nuclease family protein | DVG78_08940 | Not Available | Positive | 2185766 - 2186314 | 20680.9 |
| l-rhamnose mutarotase | DVG78_08945 | Not Available | Positive | 2186387 - 2186719 | 12957.6 |
| l-lysine dehydrogenase | DVG78_08950 | Not Available | Negative | 2186749 - 2187810 | 39149.1 |
| single-stranded-dna-specific exonuclease recj | DVG78_08955 | Not Available | Positive | 2188221 - 2189942 | 64035.7 |
| type ii toxin-antitoxin system hicb family antitoxin | DVG78_08960 | Not Available | Positive | 2189966 - 2190250 | 10708.7 |
| type ii toxin-antitoxin system hica family toxin | DVG78_08965 | Not Available | Positive | 2190253 - 2190456 | 7754.49 |
| lps export abc transporter atp-binding protein | DVG78_08970 | Not Available | Positive | 2190475 - 2191206 | 27167.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
