Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c3 hydrogenase | DVG78_08875 | Not Available | Positive | 2173243 - 2174835 | 59411.0 |
| hydrogenase maturation protease | DVG78_08880 | Not Available | Positive | 2174914 - 2175408 | 18278.9 |
| hypothetical protein | DVG78_08885 | Not Available | Positive | 2175457 - 2175765 | 11713.2 |
| hypothetical protein | DVG78_08890 | Not Available | Positive | 2176061 - 2177578 | 58152.1 |
| hydrogenase maturation nickel metallochaperone hypa | DVG78_08895 | Not Available | Positive | 2177720 - 2178073 | 13516.3 |
| hydrogenase accessory protein hypb | DVG78_08900 | Not Available | Positive | 2178066 - 2178773 | 25901.4 |
| carbamoyltransferase hypf | DVG78_08905 | Not Available | Positive | 2178787 - 2181219 | 92038.1 |
| hypc/hybg/hupf family hydrogenase formation chaperone | DVG78_08910 | Not Available | Positive | 2181249 - 2181530 | 10191.3 |
| hydrogenase formation protein hypd | DVG78_08915 | Not Available | Positive | 2181527 - 2182624 | 39970.7 |
| hydrogenase expression/formation protein hype | DVG78_08920 | Not Available | Positive | 2182696 - 2183715 | 36779.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
