Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase family protein | DVG78_06610 | Not Available | Positive | 1612112 - 1613311 | 46106.9 |
| glycosyltransferase family 2 protein | DVG78_06615 | Not Available | Negative | 1613334 - 1614350 | 39173.2 |
| glycosyl transferase | DVG78_06620 | Not Available | Negative | 1614394 - 1615374 | 38489.8 |
| rna-binding protein | DVG78_06625 | Not Available | Positive | 1615545 - 1618892 | 124162.0 |
| chbg/hpnk family deacetylase | DVG78_06630 | Not Available | Negative | 1618972 - 1619964 | 37401.2 |
| class c beta-lactamase-related serine hydrolase | DVG78_06635 | Not Available | Positive | 1620067 - 1621227 | 43969.0 |
| dna cytosine methyltransferase | DVG78_06640 | Not Available | Positive | 1621416 - 1622462 | 38866.5 |
| lysr family transcriptional regulator | DVG78_06645 | Not Available | Negative | 1622613 - 1623509 | 33685.2 |
| lysr family transcriptional regulator | DVG78_06650 | Not Available | Negative | 1623604 - 1624527 | 34847.6 |
| nadp-dependent isocitrate dehydrogenase | DVG78_06655 | Not Available | Positive | 1624621 - 1626057 | 52769.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
