Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator | DVG78_05300 | Not Available | Negative | 1263883 - 1264230 | 13086.8 |
| helix-turn-helix domain-containing protein | DVG78_05305 | Not Available | Negative | 1264465 - 1266396 | 72585.0 |
| duf418 domain-containing protein | DVG78_05310 | Not Available | Negative | 1266634 - 1267953 | 50826.8 |
| carbohydrate-binding protein | DVG78_05315 | Not Available | Positive | 1268326 - 1268892 | 20869.7 |
| hypothetical protein | DVG78_05320 | Not Available | Positive | 1269218 - 1271032 | 69388.9 |
| dna-binding response regulator | DVG78_05325 | Not Available | Positive | 1271035 - 1271727 | 25927.5 |
| duf4976 domain-containing protein | DVG78_05330 | Not Available | Negative | 1271837 - 1273417 | 59774.9 |
| ragb/susd family nutrient uptake outer membrane protein | DVG78_05335 | Not Available | Negative | 1273561 - 1273755 | 7757.32 |
| hypothetical protein | DVG78_05340 | Not Available | Negative | 1273719 - 1273859 | 5123.29 |
| duf4440 domain-containing protein | DVG78_05345 | Not Available | Negative | 1274362 - 1274883 | 18491.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
