Chryseobacterium lacus strain YLOS41

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium lacus strain YLOS41 is a rod-shaped bacterium characterized by having a single replicon. This trait is significant as it suggests a streamlined genomic architecture, which can be advantageous for adaptability and resource utilization. The strain is cataloged under the accession QPIE00000000.1, indicating its genetic sequence is publicly available for further study. As a member of the Chryseobacterium genus, this strain likely exhibits the typical metabolic versatility and ecological resilience associated with its relatives in the environment. Members of the Chryseobacterium genus are known to inhabit diverse ecological niches, including soil and aquatic environments, where they can play crucial roles in nutrient cycling and organic matter decomposition. The rod shape of Chryseobacterium lacus strain YLOS41 may confer specific advantages in motility and surface adherence, which can facilitate its survival in various habitats. Understanding these traits can provide insights into the ecological roles of Chryseobacterium species in their environments, particularly in nutrient-rich waters where they may contribute to the microbial community dynamics. Further research into the specific ecological functions of strain YLOS41 could elucidate its potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium lacus
Strainstrain YLOS41

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium lacus strain YLOS41 YLOS41_contig35, whole genome

Gene Summary

Adenine Count

717307 bp

Thymine Count

716426 bp

Guanine Count

470888 bp

Cytosine Count

471317 bp

Genome Length

2375938 bp

Protein-coding Genes

2168 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp endopeptidase proteolytic subunit clppDQ356_02605Not AvailableNegative550981 - 55166425324.7
dna primaseDQ356_02610Not AvailableNegative551728 - 55364473173.5
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeDQ356_02615Not AvailablePositive553722 - 55413215696.7
alanine dehydrogenaseDQ356_02620Not AvailablePositive554168 - 55536144001.6
hypothetical proteinDQ356_02625Not AvailablePositive555361 - 55573514478.6
hypothetical proteinDQ356_02630Not AvailableNegative556285 - 55654510318.6
hypothetical proteinDQ356_02635Not AvailablePositive556509 - 55689214340.2
duf3347 domain-containing proteinDQ356_02640Not AvailablePositive556917 - 55754023313.4
acrb/acrd/acrf family proteinDQ356_02645Not AvailablePositive557555 - 55883847800.2
acrb/acrd/acrf family proteinDQ356_02650Not AvailablePositive558841 - 56079973088.8

Displaying genes 521 – 530 of 2214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.