Chryseobacterium lacus strain YLOS41

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium lacus strain YLOS41 is a rod-shaped bacterium characterized by having a single replicon. This trait is significant as it suggests a streamlined genomic architecture, which can be advantageous for adaptability and resource utilization. The strain is cataloged under the accession QPIE00000000.1, indicating its genetic sequence is publicly available for further study. As a member of the Chryseobacterium genus, this strain likely exhibits the typical metabolic versatility and ecological resilience associated with its relatives in the environment. Members of the Chryseobacterium genus are known to inhabit diverse ecological niches, including soil and aquatic environments, where they can play crucial roles in nutrient cycling and organic matter decomposition. The rod shape of Chryseobacterium lacus strain YLOS41 may confer specific advantages in motility and surface adherence, which can facilitate its survival in various habitats. Understanding these traits can provide insights into the ecological roles of Chryseobacterium species in their environments, particularly in nutrient-rich waters where they may contribute to the microbial community dynamics. Further research into the specific ecological functions of strain YLOS41 could elucidate its potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium lacus
Strainstrain YLOS41

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium lacus strain YLOS41 YLOS41_contig35, whole genome

Gene Summary

Adenine Count

717307 bp

Thymine Count

716426 bp

Guanine Count

470888 bp

Cytosine Count

471317 bp

Genome Length

2375938 bp

Protein-coding Genes

2168 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid aminotransferaseDQ356_10425Not AvailablePositive2217093 - 221816640409.2
hypothetical proteinDQ356_10430Not AvailablePositive2218259 - 221877719593.4
peptidylprolyl isomeraseDQ356_10435Not AvailablePositive2218849 - 221988637499.6
res domain-containing proteinDQ356_10440Not AvailablePositive2220436 - 22206548480.31
m20/m25/m40 family metallo-hydrolaseDQ356_10445Not AvailableNegative2220657 - 222203951376.4
duf1015 domain-containing proteinDQ356_10450Not AvailableNegative2222074 - 222331548192.9
3-phosphoglycerate dehydrogenaseDQ356_10455Not AvailableNegative2223327 - 222428334739.0
3-phosphoserine/phosphohydroxythreonine transaminaseDQ356_10460Not AvailableNegative2224310 - 222536838771.7
4fe-4s dicluster domain-containing proteinDQ356_10465Not AvailableNegative2225441 - 222579112557.7
quinol oxidaseDQ356_10470Not AvailableNegative2225997 - 222700737774.4

Displaying genes 2071 – 2080 of 2214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.