Campylobacter novaezeelandiae strain B423b

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter novaezeelandiae strain B423b is characterized by a single replicon, which is indicative of a streamlined genetic structure often associated with this genus of bacteria. The strain is cataloged under the accession number QPGR00000000.1, facilitating its identification and further study within genomic databases. As a member of the Campylobacter genus, C. novaezeelandiae is known to be a microaerophilic, Gram-negative bacterium typically associated with the gastrointestinal tracts of birds and mammals. While specific ecological roles or pathogenicity of strain B423b are not detailed in the provided information, Campylobacter species are generally recognized for their significance in foodborne illnesses, particularly in poultry. The presence of a single replicon in C. novaezeelandiae B423b suggests potential advantages in genomic stability and adaptability, which may influence its survival in various environments. This structural characteristic may also play a role in the bacterium's evolutionary strategies, allowing it to thrive in specific ecological niches. Further research into C. novaezeelandiae strain B423b could provide valuable insights into its ecological roles, interactions with hosts, and potential impact on food safety. Understanding the genomic attributes of this strain may enhance our knowledge of Campylobacter species and their relationships within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter novaezeelandiae
Strainstrain B423b

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter novaezeelandiae strain B423b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter novaezeelandiae strain B423b Contig59, whole genome

Gene Summary

Adenine Count

572383 bp

Thymine Count

568034 bp

Guanine Count

217664 bp

Cytosine Count

213738 bp

Genome Length

1571819 bp

Protein-coding Genes

1572 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinone-dependent dihydroorotate dehydrogenaseDU473_00735Not AvailableNegative150780 - 15183238972.4
abc transporter atp-binding proteinDU473_00740Not AvailableNegative151882 - 15361565868.2
cysteine--trna ligaseDU473_00745Not AvailableNegative153590 - 15499955519.5
murein biosynthesis integral membrane protein murjDU473_00750Not AvailableNegative154996 - 15645055367.7
duf342 domain-containing proteinDU473_00755Not AvailablePositive156562 - 15841871915.3
holliday junction branch migration protein ruvaDU473_00760Not AvailablePositive158394 - 15894520249.9
d-alanine--d-alanine ligaseDU473_00765Not AvailablePositive158957 - 15999440094.4
type ii toxin-antitoxin system phd/yefm family antitoxinDU473_00770Not AvailablePositive160053 - 1602688323.21
alpha/beta fold hydrolaseDU473_00775Not AvailablePositive160271 - 16099927933.2
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDU473_00780Not AvailablePositive160992 - 16241355084.4

Displaying genes 151 – 160 of 1616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.