Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio casei |
| Strain | strain JB196 SAMN07141174.130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183861 bp
Thymine Count
1183544 bp
Guanine Count
816195 bp
Cytosine Count
803690 bp
Genome Length
3987290 bp
Protein-coding Genes
3418 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | CIK83_13180 | Not Available | Negative | 2849811 - 2850950 | 42593.7 |
| carbohydrate abc transporter permease | CIK83_13185 | Not Available | Negative | 2850968 - 2851852 | 33338.4 |
| sugar abc transporter permease | CIK83_13190 | Not Available | Negative | 2851885 - 2852769 | 33165.9 |
| porin | CIK83_13195 | Not Available | Positive | 2853300 - 2854016 | 27001.2 |
| exopolygalacturonate lyase | CIK83_13200 | Not Available | Positive | 2854107 - 2856347 | 81237.9 |
| pectin esterase | CIK83_13205 | Not Available | Positive | 2856444 - 2859107 | 98784.6 |
| guanine deaminase | CIK83_13210 | Not Available | Negative | 2859192 - 2860499 | 49390.8 |
| xanthine dehydrogenase accessory protein xdhc | CIK83_13215 | Not Available | Negative | 2860542 - 2861369 | 30954.9 |
| xanthine dehydrogenase molybdopterin binding subunit | CIK83_13220 | Not Available | Negative | 2861426 - 2863843 | 88353.2 |
| xanthine dehydrogenase small subunit | CIK83_13225 | Not Available | Negative | 2863836 - 2865317 | 54763.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



