Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio casei |
| Strain | strain JB196 SAMN07141174.130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183861 bp
Thymine Count
1183544 bp
Guanine Count
816195 bp
Cytosine Count
803690 bp
Genome Length
3987290 bp
Protein-coding Genes
3418 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-2-enoyl-coa reductase family protein | CIK83_12505 | Not Available | Positive | 2698616 - 2699812 | 44042.2 |
| isopentenyl-diphosphate delta-isomerase | CIK83_12510 | Not Available | Positive | 2700054 - 2701703 | 61772.3 |
| m48 family peptidase | CIK83_12515 | Not Available | Positive | 2701809 - 2702318 | 19645.1 |
| nudix domain-containing protein | CIK83_12520 | Not Available | Negative | 2702291 - 2702848 | 21153.2 |
| histone deacetylase | CIK83_12525 | Not Available | Negative | 2702861 - 2703799 | 34995.1 |
| d-ribose pyranase | CIK83_12530 | Not Available | Positive | 2704063 - 2704482 | 15438.7 |
| ribose abc transporter atp-binding protein rbsa | CIK83_12535 | Not Available | Positive | 2704497 - 2706002 | 55144.1 |
| ribose abc transporter permease | CIK83_12540 | Not Available | Positive | 2705999 - 2706988 | 34473.2 |
| ribose abc transporter substrate-binding protein rbsb | CIK83_12545 | Not Available | Positive | 2707086 - 2707964 | 30546.8 |
| ribokinase | CIK83_12550 | Not Available | Positive | 2708112 - 2709068 | 33848.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



